Thomas J. Near

Thomas J. Near -- (C) Thomas J. Near

Thomas J. Near

• Department of Ecology & Evolutionary Biology and Peabody Museum of Natural History, Yale University, New Haven, CT 06520, USA.
• E-mail: thomas.near@yale.edu

Beschriebene Taxa

• 25 (bisher in diesem Wiki erfasste) Taxa beschrieben von Thomas J. Near

Publikationen

1990-1999

• Song, C.B., Near, T.J. & Page, L.M. 1998. Phylogenetic relations among percid fishes as inferred from Mitochondrial Cytochrome b DNA sequence data. Molecular Phylogenetics and Evolution, 10 (3): 343-353. (doi) Zitatseite 

2000-2009

• Near, T.J. 2008. Rescued from synonymy: a redescription of Percina bimaculata Haldeman and a molecular phylogenetic analysis of logperch darters (Percidae: Etheostomatinae). Bulletin of the Peabody Museum of Natural History, 49: 3–18. Zitatseite 
• Jones, C., Damerau, M., Deitrich, K., Driscoll, R., Kock, K.-H., Kuhn, K., Moore, J., Morgan, T., Near, T., Pennington, J. & Schöling, S. 2009. Chapter 9. Demersal finfish survey of the South Orkney Islands. Pp. 49-66 in Van Cise, A.M. (Ed.): AMLR 2008/2009 Field Season Report—Objectives, Accomplishments and Tentative Conclusions, NOAA-TM-NMFS-SWFSC-445; U.S. Department of Commerce, National Oceanic & Atmospheric Administration: La Jolla, CA, USA. Zitatseite 

2010-2014

• Near, T.J., Bossu, C.M., Bradburd, G.S., Carlson, R.L., Harrington, R.C., Hollingsworth, P.R., Keck, B.P. & Etnier, D.A. 2011. Phylogeny and temporal diversification of darters (Percidae: Etheostomatinae). Systematic Biology, 60 (5): 565–595. Zitatseite 
• Dornburg, A., Moore, J.A., Webster, R., Warren, D.L., Brandley, M.C., Iglesias, T.L., Wainwright, P.C. & Near, T.J. 2012. Molecular phylogenetics of squirrelfishes and soldierfishes (Teleostei: Beryciformes: Holocentridae): Reconciling more than 100 years of taxonomic confusion. Molecular Phylogenetics and Evolution, 65: 727-738. (doi) Zitatseite 
• Near, T.J., Dornburg, A., Kuhn, K.L., Eastman, J.T., Pennington, J.N., Patarnello, T., Zane, L., Fernández, D.A. & Jones, C.D. 2012. Ancient climate change, antifreeze, and the evolutionary diversification of Antarctic fishes. Proceedings of the National Academy of Sciences, 109 (9): 3434–3439. (doi) Zitatseite 
• Wainwright, P.C., Smith, W.L., Price, S.A., Tang, K.L., Sparks, J.S., Ferry, L.A., Kuhn, K.L., Eytan, R.I. & Near, T.J. 2012. The evolution of pharyngognathy: a phylogenetic and functional appraisal of the pharyngeal jaw key innovation in labroid fishes and beyond. Systematic Biology, 61 (6): 1001–1027. (PDF) (doi) Zitatseite 
• Friedman, M., Keck, B.P., Dornburg, A., Eytan, R.I., Martin, C.H., Hulsey, C.D., Wainwright, P.C. & Near, T.J. 2013. Molecular and fossil evidence place the origin of cichlid fishes long after Gondwanan rifting. Proceedings of the Royal Society B, 280: 20131733. (doi) Zitatseite 
• Harrington, R.C., Benavides, E. & Near, T.J. 2013. Phylogenetic inference of nuptial trait evolution in the context of asymmetrical introgression in North American darters (Teleostei). Evolution, 67 (2): 388–402. (doi) Zitatseite 
• Keck, B.P. & Near, T.J. 2013. A new species of Nothonotus darter (Teleostei: Percidae) from the Caney Fork in Tennessee, USA. Bulletin of the Peabody Museum of Natural History, 54 (1): 3-21. Zitatseite 
• Near, T.J., Dornburg, A:, Eytan, R.I., Keck, B.P., Smith, W.L., Kuhn, K.L., Moore, J.A., Price, S.A., Burbrink, F.T., Friedman, M. & Wainwright, P.C. 2013. Phylogeny and tempo of diversification in the superradiation of spiny-rayed fishes. PNAS, 110 (31): 12738-12743. (doi) Zitatseite 

2015-2019

• Dornburg, A., Eytan, R.I., Federman, S., Pennington, J.N., Stewart, A.L., Jones, C.D. & Near, T.J. 2015. Molecular data support the existence of two species of the Antarctic fish genus Cryodraco (Channichthyidae). Polar Biology, First online: 26 December 2015.doi: 10.1007/s00300-015-1859-9 Zitatseite 
• Harrington, R.C. & Near, T.J. 2015. Phylogenetic relationships of Goneaperca and the evolution of parental care in darters (Teleostei: Percidae). Molecular Phylogenetics and Evolution, 84: 158–165. (doi) Zitatseite 
• Near, T.J., Dornburg, A., Harrington, R.C., Oliveira, C., Pietsch, T.W., Thacker, C.E., Satoh, T.P., Katayama, E., Wainwright, P.C., Eastman, J.T. & Beaulieu, J.M. 2015. Identification of the notothenioid sister lineage illuminates the biogeographic history of an Antarctic adaptive radiation. BMC evolutionary Biology, 15: 109. (doi) Zitatseite 
• Thacker, C.E., Satoh, T.P., Katayama, E., Harrington, R.C., Eytan, R.I. & Near, T.J. 2015. Molecular phylogeny of Percomorpha resolves Trichonotus as the sister lineage to Gobioidei (Teleostei: Gobiiformes) and confirms the polyphyly of Trachinoidei. Molecular Phylogenetics and Evolution, 93: 172–179. (doi) Zitatseite 
• Harrington, R.C., Faircloth, B.C., Eytan, R.I., Smith, W.L., Near, T.J., Alfaro, M.E. & Friedman, M. 2016. Phylogenomic analysis of carangimorph fishes reveals flatfish asymmetry arose in a blink of the evolutionary eye. BMC Evolutionary Biology, 16: 224–322. (PDF) Zitatseite 
• Giles, S., Xu, G.-H., Near, T.J. & Friedman, M. 2017. Early members of ‘living fossil’ lineage imply later origin of modern ray-finned fishes. Nature, 549 (7671): 265–268. (doi) Zitatseite 
• Kozal, L.C., Simmons, J.W., Mollish, J.M., MacGuigan, D.J., Benavides, E., Keck, B.P. & Near, T.J. 2017. Phylogenetic and Morphological Diversity of the Etheostoma zonistium Species Complex with the Description of a New Species Endemic to the Cumberland Plateau of Alabama. Bulletin of the Peabody Museum of Natural History, 58 (2): 263-286. (doi) Zitatseite 
• Near, T.J, Simmons, J.W., Mollish, J.M., Correa, M.A., Benavides, E., Harrington, R.C. & Keck, B.P. 2017. A New Species of Logperch Endemic to Tennessee (Percidae: Etheostomatinae: Percina). Bulletin of the Peabody Museum of Natural History, 58 (2): 287-309. (doi) Zitatseite 
• MacGuigan, D.J. & Near, T.J. 2018. Phylogenomic Signatures of Ancient Introgression in a Rogue Lineage of Darters (Teleostei: Percidae). Systematic Biology, 68 (2)[2019]: 329-346. (Published online: 03 November 2018). (doi) Zitatseite 
• Near, T.J, MacGuigan, D.J., Parker, E., Struthers, C.D., Jones, C.D. & Dornburg, A. 2018. Phylogenetic analysis of Antarctic notothenioids illuminates the utility of RADseq for resolving Cenozoic adaptive radiations. Molecular Phylogenetics and Evolution, 129: [1-53] 268-279. (doi) Zitatseite 
• Rabosky, D.L., Chang, J., Title, P.O., Cowman, P.F., Sallan, L., Friedman, M., Kaschner, K., Garilao, C., Near, T.J., Coll, M. & Alfaro, M.E. 2018. An inverse latitudinal gradient in speciation rate for marine fishes. Nature, 559: 392–395. (doi) Zitatseite 

2021

• Dornburg, A. & Near, T.J. 2021. The Emerging Phylogenetic Perspective on the Evolution of Actinopterygian Fishes. Annual Review of Ecology, Evolution, and Systematics, 52: 427-452. (doi) Zitatseite 
• Harrington, R.C., Friedman, M., Miya, M., Near, T.J. & Campbell, M.A. 2021. Phylogenomic resolution of the monotypic and enigmatic Amarsipus, the Bagless Glassfish (Teleostei, Amarsipidae). Zoologica Scripta, 50 (4): 411-422. (doi) Zitatseite 
• Kim, D., Bauer, B.H. & Near, T.J. 2021. Introgression and Species Delimitation in the Longear Sunfish Lepomis megalotis (Teleostei: Percomorpha: Centrarchidae). Systematic Biology, syab029. Published: 03 May 2021. (doi) Zitatseite 
• MacGuigan, D.J., Hoagstrom, C.W., Domisch, S., Hulsey, C.D. &. Near, T.J. 2021. Integrative ichthyological species delimitation in the Greenthroat Darter complex (Percidae: Etheostomatinae). Zoological Scripta, 50 (6): 707-733. (doi) Zitatseite 
• Melo, B.F., Sidlauskas, B.L., Near, T.J., Roxo, F.F., Ghezelayagh, A., Ochoa, L.E., Stiassny, M.L.J., Arroyave, J., Chang, J., Faircloth, B.C., MacGuigan, D.J., Harrington, R.C., Benine, R.C., Burns, M.D., Hoekzema, K., Sanches, N.C., Maldonado-Ocampo, J.A., Castro, R.M.C., Foresti, F., Alfaro, M.E. & Oliveira, C. 2021. Accelerated Diversification Explains the Exceptional Species Richness of Tropical Characoid Fishes. Systematic Biology, 71 (1)[2022]: 78–92. (vorab elektronisch publiziert: 7. Juni 2021). (doi) Zitatseite 
• Near, T.J. & Kim, D. 2021. Phylogeny and time scale of diversification in the fossil-rich Sunfishes and Black Basses (Teleostei: Percomorpha: Centrarchidae). Molecular Phylogenetics and Evolution, 161 (8): 107156. (doi) Zitatseite 
• Near, T.J., MacGuigan, D.J., Boring, E.L., Simmons, J.W., Albanese, B., Keck, B.P., Harrington, R.C. & Dinkins, G.R. 2021. A new species of Bridled Darter endemic to the Etowah River system in Georgia (Percidae: Etheostomatinae: Percina). Bulletin of the Peabody Museum of Natural History, 62 (1): 15-42. (doi) Zitatseite 
• White, S.L., Kazyak, D.C., Harrington, R.C., Kulp, M.A., Rash, J.M., Weathers, T.C. & Near, T.J. 2021. Phenotypic Variation in Brook Trout Salvelinus fontinalis (Mitchill) at Broad Spatial Scales Makes Morphology an Insufficient Basis for Taxonomic Reclassification of the Species. Ichthyology & Herpetology, 109 (3): 743-752. (doi) Zitatseite 

2022

• Brownstein, C.D., Kim, D., Orr, O.D., Hogue, G.M., Tracy, B.H., Pugh, M.W., Singer, R., Myles-McBurney, C., Mollish, J.M., Simmons, J.W., David, S.R., Watkins-Colwell, G., Hoffman, E.A: & Near, T.J. (in press): Hidden species diversity in a living fossil vertebrate. bioRxiv preprint (doi) Zitatseite 
• Brownstein, C.D., Kim, D., Orr, O.D., Hogue, G.M., Tracy, B.H., Pugh, M.W., Singer, R., Myles-McBurney, C., Mollish, J.M., Simmons, J.W., David, S.R., Watkins-Colwell, G., Hoffman, E.A. & Near, T.J. 2022. Hidden species diversity in an iconic living fossil vertebrate. Biology Letters, 18 (11): 20220395, [1-6]. (doi) Zitatseite 
• Ghezelayagh, A., Harrington, R.C., Burress, E.D., Campbell, M.A., Buckner, J.C., Chakrabarty, P., Glass, J.R., McCraney, W.T., Unmack, P.J., Thacker, C.E., Alfaro, M.E., Friedman, S.T., Ludt, W.B., Cowman, P.F., Friedman, M., Price, S.A., Dornburg, A., Faircloth, B.C., Wainwright, P.C. & Near, T.J. 2022. Prolonged morphological expansion of spiny-rayed fishes following the end-Cretaceous. Nature Ecology & Evolution, Published: 14 July 2022. (doi) Zitatseite 
• Kim, D., Taylor, A.T. & Near, T.J. 2022. Phylogenomics and species delimitation of the economically important Black Basses (Micropterus). Scientifc Reports, 12: 9113. (doi) Zitatseite 
• MacGuigan, D.J., Orr, O.D. & Near, T.J. 2022. Phylogeography, hybridization, and species discovery in the Etheostoma nigrum complex (Percidae: Etheostoma: Boleosoma). Molecular Phylogenetics and Evolution, 107645, Available online 15 October 2022. (doi) Zitatseite 
• Parker, E. & Near, T.J. 2022. Phylogeny Reconciles Classification in Antarctic Plunderfishes. Ichthyology & Herpetology, 110 (4): 662-674. (doi) Zitatseite 

2023

• Brownstein, C.D. & Near, T.J. 2023. Evolutionary origins of the lampriform pelagic radiation. Zoological Journal of the Linnean Society, zlad142, Published: 16 October 2023. (doi) Zitatseite 
• Harrington, R.., Kolmann, M., Day, J.J., Faircloth, B.C., Friedman, M. & Near, T.J. 2023. Dispersal sweepstakes: Biotic interchange propelled air-breathing fishes across the globe. Journal of Biogeography, First published: 27 December 2023. (doi) Zitatseite 
• MacGuigan, D.J., Krabbenhoft, T.J., Harrington, R.C., Wainwright, D.K., Backenstose, N.J.C. & Near, T.J. 2023. Lacustrine speciation associated with chromosomal inversion in a lineage of riverine fishes. Evolution, 77 (7): 1505-1521.(doi) Zitatseite 
• Near, T.J., Simmons, J.W., Strange, R.M., Brandt, S., Thomas, M.R., Harrington, R.C. & MacGuigan, D.J. 2023. Systematics of the Stripetail Darter, Etheostoma kennicotti (Putnam), and the Distinctiveness of the Upper Cumberland Endemic Etheostoma cumberlandicum Jordan and Swain. Ichthyology & Herpetology, 111 (2): 204-221. (doi) Zitatseite 
• Thomas, M.R., Blanton, R.E., Ghezelayagh, A. & Near, T.J. 2023. Species-level Recognition and Redescription of the Kentucky Arrow Darter, Etheostoma spilotum Gilbert (Percidae: Litocara). Bulletin of the Peabody Museum of Natural History, 64 (1): 39–80. (doi) Zitatseite 
• Wood, J.E., Harrington, R.C., Alley, Z.D., Thomas, M.R., Simmons, J.W. & Near, T.J. 2023. A New Species of Spottail Darter Endemic to the Clarks River in Kentucky and Tennessee (Percidae: Etheostomatinae: Etheostoma). Bulletin of the Peabody Museum of Natural History, 64 (1): 11–37. (doi) Zitatseite 

2024

• Brownstein, C.D. & Near, T.J. 2024. Colonization of the ocean floor by jawless vertebrates across three mass extinctions. BMC Ecology and Evolution, 24: 79. (doi) Zitatseite 
• Brownstein, C.D., MacGuigan, D.J., Kim, D., Orr, O., Yang, L., David, S.R., Kreiser, B. & Near, T.J. 2024. The genomic signatures of evolutionary stasis. Evolution, qpae028. (Published: 04 March 2024). (doi) Zitatseite 
• Brownstein, C.D., Zapfe, K.L., Lott, S., Harrington, R., Ghezelayagh, A., Dornburg, A. & Near, T.J. 2024. Synergistic innovations enabled the radiation of anglerfishes in the deep open ocean. Current Biology, Published:May 23, 2024. (doi) Zitatseite 
• Melo, B.F., Ota, R.P., Benine, R.C., Carvalho, F.R., Lima, F.T.C., Mattox, G.M.T., Souza, C.S., Faria, T.C., Reia, L., Roxo, F.F., Valdez-Moreno, M., Near, T.J. & Oliveira, C. 2024. Phylogenomics of Characidae, a hyper-diverse Neotropical freshwater fish lineage, with a phylogenetic classification including four families (Teleostei: Characiformes). Zoological Journal of the Linnean Society, 202 (1): zlae101. Published: 03 September 2024. (doi) Zitatseite 
• Near, T.J. & Thacker, C.E. 2024. Phylogenetic Classification of Living and Fossil Ray-Finned Fishes (Actinopterygii). Bulletin of the Peabody Museum of Natural History, 65 (1): 3-302. (doi) Zitatseite 
• Peart, C.R., Bills, R., Newton, J., Near, T.J. & Day, J.J. 2024. Do sympatric catfish radiations in Lake Tanganyika show eco-morphological diversification? Evolutionary Journal of the Linnean Society, kzae015. (doi) Zitatseite 
• Sinopoli, D., Near, T.J., David, S.R. & Chakrabarty, P. 2024. Reassignment of a junior synonym of Lepisosteus oculatus Winchell 1864 to L. platostomus Rafinesque 1820. Zootaxa, 5432 (1): 139–144. (doi) Zitatseite